Ver registro no DEDALUS
Exportar registro bibliográfico

Metrics


Metrics:

Mitochondrial genomes and comparative analyses of Culex camposi, Culex coronator, Culex usquatus and Culex usquatissimus (Diptera:Culicidae), members of the coronator group (2015)

  • Authors:
  • USP affiliated authors: SALLUM, MARIA ANICE MUREB - FSP
  • USP Schools: FSP
  • DOI: 10.1186/s12864-015-1951-0
  • Subjects: CULEX (COMPARAÇÃO;MORFOLOGIA;ANÁLISE GENÉTICA); INSETOS VETORES; SEQUENCIAMENTO GENÉTICO; MORFOLOGIA (ANATOMIA); GENOMAS; DNA MITOCONDRIAL; ARBOVÍRUS
  • Language: Inglês
  • Imprenta:
  • Source:
    • Título do periódico: BMC Genomics
    • ISSN: 1471-2164
    • Volume/Número/Paginação/Ano: v. 16, n.1, p. 831-841, Oct. 2015
  • Informações sobre o DOI: 10.1186/s12864-015-1951-0 (Fonte: oaDOI API)
    • Este periódico é de acesso aberto
    • Este artigo é de acesso aberto
    • URL de acesso aberto
    • Cor do Acesso Aberto: hybrid
    • Licença: cc-by
    Versões disponíveis em Acesso Aberto do: 10.1186/s12864-015-1951-0 (Fonte: Unpaywall API)

    Título do periódico: BMC Genomics

    ISSN: 1471-2164

    • Melhor URL em Acesso Aberto:


    • Outras alternativas de URLs em Acesso Aberto:


        • Página do artigo
        • Evidência: oa journal (via doaj)
        • Licença: cc-by
        • Versão: publishedVersion
        • Tipo de hospedagem: publisher




        • Página do artigo
        • Link para o PDF
        • Evidência: oa repository (via OAI-PMH title and first author match)
        • Licença: cc-by
        • Versão: publishedVersion
        • Tipo de hospedagem: repository


        • Página do artigo
        • Evidência: oa repository (via pmcid lookup)
        • Licença:
        • Versão: publishedVersion
        • Tipo de hospedagem: repository


    Informações sobre o Citescore
  • Título: BMC Genomics

    ISSN: 1471-2164

    Citescore - 2017: 4.08

    SJR - 2017: 2.11

    SNIP - 2017: 1.151


  • Exemplares físicos disponíveis nas Bibliotecas da USP
    BibliotecaCód. de barrasNúm. de chamada
    FSP2725207-20HEP-17/2015
    How to cite
    A citação é gerada automaticamente e pode não estar totalmente de acordo com as normas

    • ABNT

      DEMARI-SILVA, Bruna; FOSTER, Peter G; OLIVEIRA, Tatiane M. P. de; et al. Mitochondrial genomes and comparative analyses of Culex camposi, Culex coronator, Culex usquatus and Culex usquatissimus (Diptera:Culicidae), members of the coronator group. BMC Genomics, London, v. 16, n. 1, p. 831-841, 2015. Disponível em: < http://dx.doi.org/10.1186/s12864-015-1951-0 > DOI: 10.1186/s12864-015-1951-0.
    • APA

      Demari-Silva, B., Foster, P. G., Oliveira, T. M. P. de, Bergo, E. S., Sanabani, S. S., Pessôa, R., & Sallum, M. A. M. (2015). Mitochondrial genomes and comparative analyses of Culex camposi, Culex coronator, Culex usquatus and Culex usquatissimus (Diptera:Culicidae), members of the coronator group. BMC Genomics, 16( 1), 831-841. doi:10.1186/s12864-015-1951-0
    • NLM

      Demari-Silva B, Foster PG, Oliveira TMP de, Bergo ES, Sanabani SS, Pessôa R, Sallum MAM. Mitochondrial genomes and comparative analyses of Culex camposi, Culex coronator, Culex usquatus and Culex usquatissimus (Diptera:Culicidae), members of the coronator group [Internet]. BMC Genomics. 2015 ; 16( 1): 831-841.Available from: http://dx.doi.org/10.1186/s12864-015-1951-0
    • Vancouver

      Demari-Silva B, Foster PG, Oliveira TMP de, Bergo ES, Sanabani SS, Pessôa R, Sallum MAM. Mitochondrial genomes and comparative analyses of Culex camposi, Culex coronator, Culex usquatus and Culex usquatissimus (Diptera:Culicidae), members of the coronator group [Internet]. BMC Genomics. 2015 ; 16( 1): 831-841.Available from: http://dx.doi.org/10.1186/s12864-015-1951-0

    Referências citadas na obra
    Forattini OP. Entomologia Médica. 2° Volume. Culicini: Culex, Aedes e Psorophora. São Paulo, Editora da Universidade de São Paulo; 1965. Pages: 121–129.
    Bram R. Classification of Culex subgenus Culex (Diptera: Culicidae). Proc US Nat Mus. 1967;120:1–123.
    Demari-Silva B, Vesgueiro FT, Sallum MAM, Marrelli MT. Taxonomic and phylogenetic relationships between species of the genus Culex (Diptera: Culicidae) from Brazil inferred from the cytochrome c oxidase I mitochondrial gene. J Med Entomol. 2011;48:272–9.
    Laurito M, de Oliveira TMP, Almirón WR, Sallum MAM. COI barcode versus morphological identification of Culex (Culex) (Diptera: Culicidae) species: a case study using samples from Argentina and Brazil. Mem Inst Oswaldo Cruz. 2013;108:110–22.
    Vesgueiro FT, Demari-Silva B, Malfronte RS, Sallum MAM, Marrelli MT. Intragenomic variation in the second internal transcribed spacer of the ribosomal DNA of species of the genera Culex and Lutzia (Diptera: Culicidae). Mem Inst Oswaldo Cruz. 2011;106:1–8.
    Consoli RAGB, Lourenço-de-Oliveira R. Principais mosquitos de importância sanitária no Brasil. Rio de Janeiro: FIOCRUZ; 1998.
    Forattini OP. Culicidologia Médica: identificação, biologia e epidemiologia. São Paulo: EDUSP; 2002. pp. 702–703.
    Alto BW, Connelly CR, O’Meara GF, Hickman D, Karr N. Reproductive biology and susceptibility of Florida Culex coronator to infection with West Nile Virus. Vector Borne Zoonotic Dis. 2014;14:606–14.
    Saraste M. Oxidativephosphorylationat thefindesiècle. Science. 1999;283:1488–93.
    Boore JL. Animal mitochondrial genomes. Nucleic Acids Res. 1999;27:1767–80.
    Goddard JM, Wolstenholme DR. Origin and direction of replication in mitochondrial DNA molecules from Drosophila melanogaster. Proc Natl Acad Sci U S A. 1978;75:3886–90.
    Botero-Castro F, Tilak MK, Justy F, Catzeflis F, Delsuc F, Douzery EJ. Next-generation sequencing and phylogenetic signal of complete mitochondrial genomes for resolving the evolutionary history of leaf-nosed bats (Phyllostomidae). Mol Phylogenet Evol. 2013;693:728–39.
    Schierwater B, Stadler P, Desalle R, Podsiadlowski L. Mitogenomic and metazoan evolution. Mol Phylogenet Evol. 2013;69:311–2.
    Williams ST, Foster PG, Littlewood DT. The complete mitochondrial genome of a turbinid vetigastropod from MiSeq Illumina sequencing of genomic DNA and steps towards a resolved gastropod phylogeny. Gene. 2014;533:38–47.
    Foster PG, Bergo ES, Bourke BP, Oliveira TM, Nagaki SS, Sant’Ana DC, et al. Phylogenetic analysis and DNA-based species confirmation in Anopheles (Nyssorhynchus). PLoS One. 2013;8:e54063.
    Folmer O, Black M, Hoeh W, Lutz R, Vrijenhoek R. DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Mol Mar Biol Biotechnol. 1994;3:294–9.
    Kambhampati S, Smith PT. PCR primers for amplification of four insect mitochondrial gene fragments. Insect Mol Biol. 1995;4:233–6.
    Chevreux B, Wetter T, Suhai S. Genome sequence assembly using trace signals and additional sequence information. Comput Sci Biol Proc. 1999;99:45–56. German Conference on Bioinformatics GCB.
    Milne I, Stephen G, Bayer M, Cock PJ, Pritchard L, Cardle L, et al. Using Tablet for visual exploration of second-generation sequencing data. Brief Bioinform. 2013;14:193–202.
    Bernt M, Donath A, Jühling F, Externbrink F, Florentz C, Fritzsch G, et al. MITOS: Improved de novo Metazoan mitochondrial genome annotation. Mol Phylogenet Evol. 2013;69:313–9.
    Birney E, Durbin R. Using Gene Wise in the Drosophila annotation experiment. Genome Res. 2000;10:547–8.
    Tamura K, Stecher G, Peterson D, Filipski A, Kumar S. MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0. Mol Phylogenet Evol. 2013;30:2725–9.
    Perna NT, Kocher TD. Patterns of nucleotide composition at fourfold degenerate sites of animal mitochondrial genomes. J Mol Evol. 1995;41:353–8.
    Schattner P, Brooks AN, Lowe TM. The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs. Nucleic Acids Res. 2005;1:33.
    Librado P, Rozas J. DnaSPv5: a software for comprehensive analysis of DNA. Bioinformatics. 2009;25:1451–2.
    Zhang Z, Li J, Zhao XQ, Wang J, Wong GK, Yu J. KaKs Calculator: Calculating Ka and Ks through model selection and model averaging. Genomics Proteomics Bioinformatics. 2006;4:259–63.
    Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, McWilliam H, et al. ClustalW and ClustalX version2.0. Bioinformatics. 2007;23:2947–8.
    BioEdit HT. a user-friendly biological sequence alignment editor and analysis program for windows 95/98/NT. Nucleic Acids Symp Ser (Oxf). 1999;41:95–8.
    Posada D. jModelTest:phylogenetic model averaging. Mol Biol Evol. 2008;25:1253–6.
    Huelsenbeck JP, Ronquist F. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics. 2001;17:754–5.
    Beard CB, Hamm DM, Collins FH. The mitochondrial genome of the mosquito Anopheles gambiae: DNA sequence, genome organization, and comparisons with mitochondrial sequences of other insects. Insect Mol Biol. 1993;2:103–24.
    Behura SK, Lobo NF. Haas B, deBruyn B, Lovin DD, Shumway MF et al. Complete sequences of mitochondrial genomes of Aedes aegypti and Culex quinquefasciatus and comparative analysis of mitochondrial DNA fragments inserted in the nuclear genomes. Insect Biochem Mol Biol. 2011;41:770–7.
    Logue K, Chan ER, Phipps T, Small ST, Reimer L, Henry-Halldin C, et al. Mitochondrial genome sequences reveal deep divergences among Anopheles punctulatus sibling species in Papua New Guinea. Malar J. 2013;12:64.
    Krzywinski J, Li C, Morris M, Conn JE, Lima JB, Povoa MM, et al. Analysis of the evolutionary forces shaping mitochondrial genomes of a Neotropical malaria vector complex. Mol Phylogenet Evol. 2011;58:469–77.
    Lloyd R, Streeter SD, Foster PG, Littlewood DTJ, Huntley J, Beckham GT, et al. The complete mitochondrial genome of Limnoria quadripunctata Holthuis (Isopoda: Limnoriidae). Mitochondrial DNA. 2014;10:1–2.
    Chen YH, Huang DY, Wang Y, Zhu CD, Hao JS. The complete mitochondrial genome of the endangered Apollo butterfly, Parnassius apollo (Lepidoptera: Papilionidae) and its comparison to other Papilionidae species. J Asia-Pacific Entomology. 2014;17:663–71.
    Sun WY, Xu DL, Chen HX, Shi W, Sundberg P, Sun SC. Complete mitochondrial genome sequences of two parasitic/commensal nemerteans, Gononemertes parasite and Nemertopsis tetraclitophila (Nemertea: Hoplonemertea). Parasit Vectors. 2014;19:273.
    Sun Z, Wan DG, Murphy RW, Ma L, Zhang XS, Huang DW. Comparison of base composition and codon usage in Insects. Genes Genomics. 2009;31:65–71.
    Nardi F, Carapelli A, Fanciulli PP, Dallai R, Frati F. The complete mitochondrial DNA sequence of the basal hexapod Tetrodontophora bielanensis: evidence for heteroplasmy and tRNA translocations. Mol Biol Evol. 2001;18:1293–304.
    de Bruijn MH. Drosophila melanogaster mitochondrial DNA, a novel organization and genetic code. Nature. 1983;304:234–41.
    Krzywinski J, Grushko OG, Besansky NJ. Analysis of the complete mitochondrial DNA from Anopheles funestus: an improved dipteran mitochondrial genome annotation and a temporal dimension of mosquito evolution. Mol Phylogenet Evol. 2006;39:417–23.
    Salvato P, Simonato M, Battisti A, Negrisolo E. The complete mitochondrial genome of the bag-shelter moth Ochrogaster lunifer (Lepidoptera, Notodontidae). BMC Genomics. 2008;9:331.
    Montooth KL, Abt DN, Hofmann JW, Rand DM. Comparative genomics of Drosophila mtDNA: novel features of conservation and change across functional domains and lineages. J Mol Evol. 2009;69:94–114.
    Zhao F, Huang DY, Sun XY, Shi QH, Hao JS, Yang Q. The first mitochondrial genome for the butterfly family Riodinidae (Abisara fylloides) and its systematic implications. Zoological Res. 2013;34:109–19.
    Cook CE. The complete mitochondrial genome of the stomatopod crustacean Squilla mantis. BMC Genomics. 2005;6:105.
    Caccone A, Garcia BA, Powell JR. Evolution of the mitochondrial DNA control region in the Anopheles gambiae complex. Insect Mol Biol. 1996;5:51–9.
    Moritz C, Dowling TE, Brown WM. Evolution of Animal Mitochondrial DNA: Relevance for Population Biology and Systematics. Annu Rev Ecol Syst. 1987;18:269–92.
    Hebert PD, Cywinska A, Ball SL, de Waard JR. Biological identifications through DNA barcodes. Proc Biol Sci. 2003;270:313–21.
    Jia WZ, Yan HB, Guo AJ, Zhu XQ, Wang YC, Shi WG, et al. Complete mitochondrial genomes of Taenia multiceps, T.hydatigena and T.pisiformis: additional molecular markers for tape worm genus of human and animal health significance. BMC Genomics. 2010;11:447.
    Xie Y, Zhang Z, Niu L, Wang Q, Wang C, Lan J, et al. The mitochondrial genome of Baylisascaris procyonis. PLoS One. 2011;6:e27066.
    Jabbar A, Beveridge I, Mohandas N, Chilton NB, Littlewood DT, Jex AR, et al. Analyses of mitochondrial amino acid sequence datasets support the proposal that specimens of Hypodontus macropi from three species of macropodid hosts represent distinct species. BMC Evol Biol. 2013;13:259.
    Broughton RE, Milam JE, Roe BA. The complete sequence of the zebra fish (Daniorerio) mitochondrial genome and evolutionary patterns invertebrate mitochondrial DNA. Genome Res. 2001;11:1958–67.
    Le TH, Pearson MS, Blair D, Dai N, Zhang LH, McManus DP. Complete mitochondrial genomes confirm the distinctiveness of the horse-dog and sheep-dog strains of Echinococcus granulosus. Parasitology. 2002;124:97–112.
    Cheng R, Zheng X, Ma Y, Li Q. The complete mitochondrial genomes of two octopods Cistopus chinensis and Cistopus taiwanicus: Revealing the phylogenetic position of the genus Cistopus within the Order Octopoda. PLoS One. 2013;17:e842.
    Lloyd RE, Foster PG, Guille M, Littlewood DT. Next generation sequencing and comparative analyses of Xenopus mitogenomes. BMC Genomics. 2012;13:496.
    Laurito M, Almirón W. Phylogenetic relationships of Culex (Culex) species (Diptera, Culicidae) from Argentina based on morphological characters. Zootaxa. 2013;3652:117–55.