Ver registro no DEDALUS
Exportar registro bibliográfico



Carbon mineralization pathways and bioturbation in coastal Brazilian sediments (2015)

  • Authors:
  • USP affiliated authors: SUMIDA, PAULO YUKIO GOMES - IO
  • USP Schools: IO
  • DOI: 10.1038/srep16122
  • Language: Inglês
  • Imprenta:
  • Source:
    • Título do periódico: Scientific Reports
    • Volume/Número/Paginação/Ano: v. 5, art. 1622, 2015
  • Acesso online ao documento

    Online accessDOI or search this record in
    Informações sobre o DOI: 10.1038/srep16122 (Fonte: oaDOI API)
    • Este periódico é de acesso aberto
    • Este artigo é de acesso aberto
    • URL de acesso aberto
    • Cor do Acesso Aberto: hybrid
    • Licença: cc-by
    Versões disponíveis em Acesso Aberto do: 10.1038/srep16122 (Fonte: Unpaywall API)

    Título do periódico: Scientific Reports

    ISSN: 2045-2322

    • Melhor URL em Acesso Aberto:

    • Outras alternativas de URLs em Acesso Aberto:

        • Página do artigo
        • Evidência: oa journal (via doaj)
        • Licença: cc-by
        • Versão: publishedVersion
        • Tipo de hospedagem: publisher

        • Página do artigo
        • Evidência: oa repository (via pmcid lookup)
        • Licença:
        • Versão: publishedVersion
        • Tipo de hospedagem: repository

    Informações sobre o Citescore
  • Título: Scientific Reports

    ISSN: 2045-2322

    Citescore - 2017: 4.36

    SJR - 2017: 1.533

    SNIP - 2017: 1.245

  • How to cite
    A citação é gerada automaticamente e pode não estar totalmente de acordo com as normas

    • ABNT

      QUINTANA, Cintia Organo; KRISTENSEN, Erik; SUMIDA, Paulo Yukio Gomes; et al. Carbon mineralization pathways and bioturbation in coastal Brazilian sediments. Scientific Reports, London, v. 5, 2015. Disponível em: < > DOI: 10.1038/srep16122.
    • APA

      Quintana, C. O., Kristensen, E., Sumida, P. Y. G., Shimabukuro, M., Pereira, C. O., Alves, B. G. R., et al. (2015). Carbon mineralization pathways and bioturbation in coastal Brazilian sediments. Scientific Reports, 5. doi:10.1038/srep16122
    • NLM

      Quintana CO, Kristensen E, Sumida PYG, Shimabukuro M, Pereira CO, Alves BGR, Moraes PC, Thomas Valdemarsen T. Carbon mineralization pathways and bioturbation in coastal Brazilian sediments [Internet]. Scientific Reports. 2015 ; 5Available from:
    • Vancouver

      Quintana CO, Kristensen E, Sumida PYG, Shimabukuro M, Pereira CO, Alves BGR, Moraes PC, Thomas Valdemarsen T. Carbon mineralization pathways and bioturbation in coastal Brazilian sediments [Internet]. Scientific Reports. 2015 ; 5Available from:

    Referências citadas na obra
    Kristensen, E., Delefosse, M., Quintana, C. O., Flindt, M. R. & Valdemarsen, T. Influence of benthic macrofauna community shifts on ecosystem functioning in shallow estuaries. Front. Mar. Sci. 41, 1–14 (2014).
    Kristensen, E. et al. What is bioturbation: the need for a precise definition for fauna in aquatic sciences. Mar. Ecol. Prog. Ser. 446, 285–302 (2012).
    Valdemarsen, T., Quintana, C. O., Kristensen, E. & Flindt, M. R. Reactivity of organic-rich sediments through microbial degradation: implications for eutrophic estuaries. Mar. Ecol. Prog. Ser. 503, 41–58 (2014).
    Kristensen, E. Organic matter diagenesis at the oxic/anoxic interface in coastal marine sediments, with emphasis on the role of burrowing animals. Hydrologia 426, 1–24 (2000).
    Canfield, D. E. et al. Pathways of organic carbon oxidation in three continental margins. Mar. Geol. 113, 27–40 (1993).
    Yoshinaga, M. Y., Sumida, P. Y. G. & Wakeham, S. G. Lipids biomarkers in surface sediments from unusual coastal upwelling area from the SW Atlantic Ocean. Org. Geochem. 39, 1385–1399 (2008).
    Venturini, N., Salhi, M., Bessonart, M. & Pires-Vanin, A. M. S. Fatty acid biomarkers of organic matter sources and early diagenetic signatures in sediments from a coastal upwelling area (south-eastern Brazil). Chem. Ecol. 28, 221–238 (2011).
    Quintana, C. O., Moraes, P. C., Yoshinaga, M. Y., Wakeham, S. & Sumida, P. Y. G. Microbial biomass response to different quantities and sources of organic matter in Brazilian coastal sediments. Mar. Ecol. 10.1111/maec.12182 (2014)
    Moraes, P. C., Franco, D. C., Pellizari, V. H. & Sumida, P. Y. G. Effect of plankton-derived organic matter on the microbial community in coastal marine sediments. J. Exp. Mar. Biol. Ecol. 461, 257–266 (2014).
    Bertics, V. J. & Ziebis, W. Biodiversity of benthic microbial communities in bioturbated coastal sediments is controlled by geochemical microniches. The ISME Journal 3, 1269–1285 (2009).
    Nielsen, O., Kristensen, E. & Holmer, M. Impact of Arenicola marina (Polychaeta) on sediment sulfur dynamics. Aquat. Microb. Biol. 33, 95–105 (2003).
    Nielsen, O., Kristensen, E. & Macintosh, D. Impact of fiddler crabs (Uca spp.) on rates and pathways of benthic mineralization in deposited mangrove shrimp pond waste. J. Exp. Mar. Biol. Ecol. 289, 59–81 (2003).
    Alves, B. G. R., Güth, A. Z., Bícego, M. C., Gaeta, S. A. & Sumida, P. Y. G. Benthic community structure and organic matter variation in response to oceanographic events at the Brazilian SE inner shelf. Cont. Shelf Res. 85, 106–116 (2014).
    Quintana, C. O., Bernardino, A. F., Moraes, P. C., Valdemarsen, T. & Sumida, P. Y. G. Effects of coastal upwelling on the structure of macrofaunal communities. J. Mar. Syst. 143, 120–129 (2014).
    Kristensen, E. et al. Microbial carbon oxidation rates and pathways in sediments of two Tanzanian mangrove forests. Biogeochemistry 103, 143–158 (2011).
    Jensen, M., Thamdrup, B., Rysgaard, S., Holmer, M. & Fossing, H. Rates and regulation of microbial iron reduction in sediments of Baltic-North Sea transition. Biogeochemistry 65, 295–317 (2003).
    Aller, R. C., Mackin, J. E. & Cox, R. T. Jr. Diagenesis of Fe and S in Amazon inner shelf muds: Apparent dominance of Fe reduction and implications for the genesis of ironstones. Cont. Shelf Res. 6, 263–289 (1986).
    Alongi, D. M., Wirasantosa, S., Wagey, T. & Trott, L. A. Early diagenetic processes in relation to river discharge and coastal upwelling in the Aru Sea, Indonesia. Mar. Chem. 140–141, 10–23 (2012).
    Vandieken, V., Nickel, M. & Jørgensen, B. B. Carbon mineralization in Artic sediments northeast of Svalbard: Mn(IV) and Fe(III) reduction as principal anaerobic respiration pathways. Mar. Ecol. Prog. Ser. 322, 15–27 (2006).
    Mahiques, M. M., Tessler, M. & Furtado, V. V. Characterization of energy gradient in enclosed bays of Ubatuba region, Southeastern Brazil. Estuar. Coast. Shelf Sci. 47, 431–446 (1998).
    Mahiques, M. M. et al. Hydrodynamically driven patterns of recent sedimentation in the shelf and upper slope off Southeast Brazil. Cont. Shelf Res. 24, 1685–1697 (2004).
    Santos, M. F. L. & Pires-Vanin, A. M. S. Structure and dynamics of the macrobenthic communities of Ubatuba Bay, Southeastern Brazilian Coast. Braz. J. Oceanogr. 52, 59–73 (2004).
    Forster, S., Glud, R. N., Gundersen, J. K. & Huettel, M. In situ study of bromide tracer and oxygen flux in coastal sediments. Estuar. Coast. Shelf Sci. 49, 813–827 (1999).
    Valdemarsen, T., Kristensen, E. & Holmer, M. Sulfur, carbon and nitrogen cycling in faunated marine sediments impacted by repeated organic enrichment. Mar. Ecol. Prog. Ser. 400, 37–53 (2010).
    Kristensen, E. et al. Distribution pattern of benthic invertebrates in Danish estuaries: The use of Taylor’s power law as species-specific indicator of dispersion and behavior. J. Sea Res. 77, 70–78 (2013).
    Burone, L., Muniz, P., Pires-Vanin, A. M. S. & Rodrigues, M. Spatial distribution of organic matter in the surface sediments of Ubatuba Bay (Southeastern -Brazil). An. Acad. Bras. Ciênc. 75, 77–90 (2003).
    Kristensen, E. & Hansen, K. Decay of plant detritus in organic-poor sandy sediment: Production rates and stoichiometry of dissolved C and N compounds. J. Mar. Res. 53, 675–702 (1995).
    Kristensen, E. & Hansen, K. Transport of carbon dioxide and ammonium in bioturbated (Nereis diversicolor) coastal, marine sediments. Biogeochemistry 45, 147–168 (1999).
    Kristensen, E. & Holmer, M. Decomposition of plant materials in marine sediments exposed to different electron acceptors (O2, NO3−, SO42−), with emphasis on the substrate origin, degradation kinetics and the role of bioturbation. Geochim. Cosmochim. Acta 65, 419–433 (2001).
    Gaeta, S. A., Ribeiro, S. M. S., Metzer, P. M., Francos, M. S. & Abe, D. S. Environmental forcing on phytoplankton biomass and primary productivity of the coastal ecosystem in Ubatuba region, southern Brazil. Rev. Bras. Oceanogr. 47, 11–27 (1999).
    Quintana C. O., Yoshinaga, M. Y. & Sumida, P. Y. G. Benthic responses to organic matter variation in a subtropical coastal area. Mar. Ecol. 31, 457–472 (2010).
    Galluci, F. & Netto, S. A. Effects of passage of cold fronts over a coastal site: an ecosystem approach. Mar. Ecol. Prog. Ser. 281, 79–92 (2004).
    Strickland, J. D. & Parsons, T. R. A practical handbook of seawater analysis. Fisheries Research Board of Canada 167, 311pp. (1972).
    Hall, P. O. J. & Aller, R. C. Rapid, small-volume, flow injection analysis for ΣCO2 and NH4+ in marine and freshwaters. Limnol. Oceanogr. 37, 1113–1119 (1992).
    Stookey, L. L. Ferrozine—a new spectrophotometric reagent for iron. Anal. Chem. 42, 779–781 (1970).
    Parsons, T. R., Maita, Y. & Lalli, C. M. A manual of chemical and biological methods for seawater analysis. (Pergamon Press, Oxford, 1984).
    Lovley, D. R. & Phillips, E. J. P. Rapid assay for microbially reducible ferric iron in aquatic sediments. Appl. Environ. Microb. 53, 1536–1540 (1987).
    Li, Y. & Gregory, S. Diffusion of ions in sea water and deep-sea sediments. Geochim. Cosmochim. Acta 38, 703–718 (1974).
    Rumohr, H., Brey, T. & Ankar, S. A compilation of biometric conversion factors for benthic invertebrates of the Baltic Sea. The Baltic Marine Biologists Publications No. 9, 1–56 (1987).
    Ricciardi, A. & Bourget, E. Weight-to-weight conversion factors for marine benthic invertebrates. Mar. Ecol. Prog. Ser. 163, 245–251 (1998).
    Banse, K. Mass-scales rates of respiration and intrinsic growth in very small invertebrates. Mar. Ecol. Prog. Ser. 9, 281–297 (1982).
    Holmoe, N. & Kristensen E. Ammonium adsorption in sediments of a tropical mangrove forest (Thailand) and a temperate Wadden Sea area (Denmark). Wetl. Ecol. Manag. 10, 453–460 (2002).